About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54225EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Paelopatides54226-
Paelopatides54227REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54228METHYLMALONYL-COA MUTASE
Paelopatides54229HYALURONAN MEDIATED MOTILITY RECEPTOR
Paelopatides54230ACYL-COA SYNTHETASE
Paelopatides54231EPM2A-INTERACTING PROTEIN 1
Paelopatides54232ACYL-COA SYNTHETASE
Paelopatides54233CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54234ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN
Paelopatides54235ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN
Paelopatides54236NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides54237-
Paelopatides54238-
Paelopatides54239DISCS LARGE
Paelopatides54240UNCHARACTERIZED
Paelopatides54241-
Paelopatides54242RFX TRANSCRIPTION FACTOR FAMILY
Paelopatides54243ISOMERASE
Paelopatides54244SIMILAR TO HYPOTHETICAL PROTEIN MGC34837
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