About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54464PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
Paelopatides54465-
Paelopatides54466ATP-DEPENDENT DNA HELICASE
Paelopatides54467-
Paelopatides54468NETRIN RECEPTOR UNC5
Paelopatides54469SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54470SI:CH211-108C17.2-RELATED-RELATED
Paelopatides54471PROTEIN CBG26694
Paelopatides54472ENDONUCLEASE-RELATED
Paelopatides54473-
Paelopatides54474-
Paelopatides54475-
Paelopatides54476-
Paelopatides54477-
Paelopatides54478PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides54479REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54480PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides54481PECANEX
Paelopatides54482PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides54483-
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