About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_012840-T1ZINC FINGER PROTEIN
LLU|FUN_012841-T1
LLU|FUN_012842-T1ZINC FINGER AND SCAN DOMAIN-CONTAINING
LLU|FUN_012843-T1
LLU|FUN_012844-T1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_012845-T11-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED
LLU|FUN_012846-T1-
LLU|FUN_012847-T1
LLU|FUN_012848-T1
LLU|FUN_012849-T1YIPPEE DOMAIN-CONTAINING PROTEIN
LLU|FUN_012850-T1
LLU|FUN_012851-T1
LLU|FUN_012852-T1
LLU|FUN_012853-T1
LLU|FUN_012854-T1
LLU|FUN_012855-T1
LLU|FUN_012856-T1
LLU|FUN_012857-T1
LLU|FUN_012858-T1
LLU|FUN_012859-T1
LLU|FUN_012860-T1COLLAGEN ALPHA
LLU|FUN_012861-T1DENTIN SIALOPHOSPHOPROTEIN
LLU|FUN_012862-T1D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
LLU|FUN_012863-T1D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
LLU|FUN_012864-T1
LLU|FUN_012865-T1FRIZZLED
LLU|FUN_012866-T1STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
LLU|FUN_012867-T1VOLTAGE-GATED POTASSIUM CHANNEL
LLU|FUN_012868-T1
LLU|FUN_012869-T1
LLU|FUN_012870-T1INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEIN
LLU|FUN_012871-T1ARMADILLO REPEAT CONTAINING PROTEIN
LLU|FUN_012872-T1MITOCHONDRIAL RIBOSOMAL PROTEIN S25
LLU|FUN_012873-T1FYVE-FINGER-CONTAINING RAB5 EFFECTOR PROTEIN RABENOSYN-5-RELATED
LLU|FUN_012874-T1COPINE
LLU|FUN_012875-T1
LLU|FUN_012876-T1PYRUVATE-FLAVODOXIN OXIDOREDUCTASE-RELATED
LLU|FUN_012877-T1SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
LLU|FUN_012878-T1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
LLU|FUN_012879-T1HEMK METHYLTRANSFERASE
LLU|FUN_012880-T1HIGH MOBILITY GROUP PROTEINS HMG-A AND C
LLU|FUN_012881-T1
LLU|FUN_012882-T1
LLU|FUN_012883-T1
LLU|FUN_012884-T1PROGRAMMED CELL DEATH PROTEIN 7
LLU|FUN_012885-T1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
LLU|FUN_012886-T1IMPORTIN-7, 8, 11
LLU|FUN_012887-T1
LLU|FUN_012888-T1
LLU|FUN_012889-T1
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