About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_012996-T1HL01030P-RELATED
LLU|FUN_012997-T1RAB GDP/GTP EXCHANGE FACTOR
LLU|FUN_012998-T1
LLU|FUN_012999-T1
LLU|FUN_013000-T1TOLL-LIKE RECEPTOR
LLU|FUN_013001-T1
LLU|FUN_013002-T1PROTEIN CBG17025
LLU|FUN_013003-T1CYTOCHROME P450 FAMILY 3
LLU|FUN_013004-T1
LLU|FUN_013005-T1
LLU|FUN_013006-T1URINARY PROTEIN RUP /ACROSOMAL PROTEIN SP-10
LLU|FUN_013007-T1
LLU|FUN_013008-T1
LLU|FUN_013009-T1RIKEN CDNA 6820408C15
LLU|FUN_013010-T1SYS1
LLU|FUN_013011-T1VACUOLAR SORTING PROTEIN 35
LLU|FUN_013012-T1
LLU|FUN_013013-T1
LLU|FUN_013014-T1
LLU|FUN_013015-T1ZINC FINGER PROTEIN
LLU|FUN_013016-T1RABCONNECTIN-3B, ISOFORM A
LLU|FUN_013017-T1
LLU|FUN_013018-T1
LLU|FUN_013019-T1CRUMBS FAMILY MEMBER
LLU|FUN_013020-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_013021-T1
LLU|FUN_013022-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_013023-T1EXPRESSED PROTEIN
LLU|FUN_013024-T1ATP-DEPENDENT RNA HELICASE
LLU|FUN_013025-T1C-TYPE LECTIN DOMAIN FAMILY 20 MEMBER A-RELATED
LLU|FUN_013026-T1
LLU|FUN_013027-T1
LLU|FUN_013028-T1
LLU|FUN_013029-T1MYOSIN
LLU|FUN_013030-T1
LLU|FUN_013031-T1
LLU|FUN_013032-T1
LLU|FUN_013033-T1
LLU|FUN_013034-T1
LLU|FUN_013035-T1
LLU|FUN_013036-T1
LLU|FUN_013037-T1
LLU|FUN_013038-T1
LLU|FUN_013039-T1MITOCHONDRIAL RIBOSOMAL PROTEIN S31
LLU|FUN_013040-T1OSTEOPETROSIS ASSOCIATED TRANSMEMBRANE PROTEIN 1
LLU|FUN_013041-T1NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
LLU|FUN_013042-T1NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
LLU|FUN_013043-T1
LLU|FUN_013044-T1AMINOTRANSFERASE
LLU|FUN_013045-T1HOMEOBOX PROTEIN EMX-RELATED
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