About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_012890-T1IMPORTIN-7, 8, 11
LLU|FUN_012891-T1F-BOX ONLY PROTEIN 4
LLU|FUN_012892-T1KELCH DOMAIN-CONTAINING PROTEIN
LLU|FUN_012893-T1MYOSIN
LLU|FUN_012894-T1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
LLU|FUN_012895-T1
LLU|FUN_012896-T1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
LLU|FUN_012897-T1MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S27
LLU|FUN_012898-T1CGI-41 METHYLTRANSFERASE
LLU|FUN_012899-T1MYOTUBULARIN-RELATED
LLU|FUN_012900-T1CARNITINE O-ACYLTRANSFERASE
LLU|FUN_012901-T1
LLU|FUN_012902-T1ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_012903-T1MONOACYLGLYCEROL LIPASE
LLU|FUN_012904-T1
LLU|FUN_012905-T1ACID CLUSTER PROTEIN 33
LLU|FUN_012906-T1CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7
LLU|FUN_012907-T1SHC TRANSFORMING PROTEIN
LLU|FUN_012908-T1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 9 ZCCHC9
LLU|FUN_012909-T1MOLTING PROTEIN MLT-4
LLU|FUN_012910-T1
LLU|FUN_012911-T1
LLU|FUN_012912-T1
LLU|FUN_012913-T1PROTEIN EVA-1
LLU|FUN_012914-T1
LLU|FUN_012915-T1
LLU|FUN_012916-T1
LLU|FUN_012917-T1APOSPORY-ASSOCIATED PROTEIN C-RELATED
LLU|FUN_012918-T1
LLU|FUN_012919-T1
LLU|FUN_012920-T1
LLU|FUN_012921-T1
LLU|FUN_012922-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_012923-T1
LLU|FUN_012924-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_012925-T1
LLU|FUN_012926-T1
LLU|FUN_012927-T1
LLU|FUN_012928-T1
LLU|FUN_012929-T1
LLU|FUN_012930-T1
LLU|FUN_012931-T1
LLU|FUN_012932-T1
LLU|FUN_012933-T1CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2
LLU|FUN_012934-T1
LLU|FUN_012935-T1TATA-BOX BINDING PROTEIN
LLU|FUN_012936-T1PROTEASOME SUBUNIT ALPHA/BETA
LLU|FUN_012937-T1
LLU|FUN_012938-T1LP21163P
LLU|FUN_012939-T1
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