About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_012587-T1EXOSOME COMPLEX COMPONENT
LLU|FUN_012588-T13BP-1 RELATED RHOGAP
LLU|FUN_012589-T1
LLU|FUN_012590-T1DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE
LLU|FUN_012591-T1ZINC FINGER PROTEIN 598
LLU|FUN_012592-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 3
LLU|FUN_012593-T1
LLU|FUN_012594-T1
LLU|FUN_012595-T1
LLU|FUN_012596-T1
LLU|FUN_012597-T1
LLU|FUN_012598-T1
LLU|FUN_012599-T1
LLU|FUN_012600-T1
LLU|FUN_012601-T1MALATE AND LACTATE DEHYDROGENASE
LLU|FUN_012602-T1UNC80
LLU|FUN_012603-T1
LLU|FUN_012604-T1
LLU|FUN_012605-T1TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
LLU|FUN_012606-T1
LLU|FUN_012607-T1
LLU|FUN_012608-T1
LLU|FUN_012609-T1
LLU|FUN_012610-T1
LLU|FUN_012611-T1
LLU|FUN_012612-T1
LLU|FUN_012613-T1
LLU|FUN_012614-T1
LLU|FUN_012615-T1SOLUTE CARRIER FAMILY 35
LLU|FUN_012616-T1
LLU|FUN_012617-T1
LLU|FUN_012618-T1
LLU|FUN_012619-T1
LLU|FUN_012620-T1
LLU|FUN_012621-T1METHIONINE--TRNA LIGASE
LLU|FUN_012622-T1NUCLEAR FACTOR ERYTHROID 2-RELATED FACTOR
LLU|FUN_012623-T1
LLU|FUN_012624-T1
LLU|FUN_012625-T1
LLU|FUN_012626-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_012627-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_012628-T1
LLU|FUN_012629-T1ZONA PELLUCIDA BINDING PROTEIN SP38
LLU|FUN_012630-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_012631-T1EPPIN
LLU|FUN_012632-T1
LLU|FUN_012633-T1
LLU|FUN_012634-T1PROTEIN CBG12054-RELATED
LLU|FUN_012635-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_012636-T1
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