About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_012330-T1
LLU|FUN_012331-T1
LLU|FUN_012332-T1
LLU|FUN_012333-T1UNCHARACTERIZED PROTEIN C1ORF50
LLU|FUN_012334-T1NAD KINASE
LLU|FUN_012335-T1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10
LLU|FUN_012336-T1CHLORIDE INTRACELLULAR CHANNEL, ISOFORM A
LLU|FUN_012337-T1
LLU|FUN_012338-T1
LLU|FUN_012339-T1
LLU|FUN_012340-T1
LLU|FUN_012341-T1NLPC_P60 DOMAIN-CONTAINING PROTEIN
LLU|FUN_012342-T1TTC17 PROTEIN
LLU|FUN_012343-T1VALACYCLOVIR HYDROLASE
LLU|FUN_012344-T1
LLU|FUN_012345-T1-
LLU|FUN_012346-T1WD REPEAT-CONTAINING PROTEIN 97
LLU|FUN_012347-T13-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE
LLU|FUN_012348-T1
LLU|FUN_012349-T1AMINO ACID TRANSPORTER
LLU|FUN_012350-T1
LLU|FUN_012351-T1
LLU|FUN_012352-T1CALCIUM BINDING PROTEIN
LLU|FUN_012353-T1UBIQUITIN-CONJUGATING ENZYME E2
LLU|FUN_012354-T1
LLU|FUN_012355-T1
LLU|FUN_012356-T1
LLU|FUN_012357-T1MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN
LLU|FUN_012358-T1-
LLU|FUN_012359-T1N-ACETYLTRANSFERASE
LLU|FUN_012360-T1
LLU|FUN_012361-T1ADENOSINE/GUANOSINE DIPHOSPHATASE
LLU|FUN_012362-T1ADENOSINE/GUANOSINE DIPHOSPHATASE
LLU|FUN_012363-T1ADENOSINE/GUANOSINE DIPHOSPHATASE
LLU|FUN_012364-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_012365-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_012366-T1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
LLU|FUN_012367-T1
LLU|FUN_012368-T1
LLU|FUN_012369-T1
LLU|FUN_012370-T1
LLU|FUN_012371-T1
LLU|FUN_012372-T1
LLU|FUN_012373-T1
LLU|FUN_012374-T1
LLU|FUN_012375-T1JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE
LLU|FUN_012376-T1
LLU|FUN_012377-T1
LLU|FUN_012378-T1TYROSINE-PROTEIN KINASE RECEPTOR
LLU|FUN_012379-T1SETA BINDING PROTEIN 1
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