About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_012487-T1
LLU|FUN_012488-T1
LLU|FUN_012489-T1
LLU|FUN_012490-T1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
LLU|FUN_012491-T1NOTCH LIGAND FAMILY MEMBER
LLU|FUN_012492-T1
LLU|FUN_012493-T1
LLU|FUN_012494-T1HEAVY PROTEIN, PUTATIVE-RELATED
LLU|FUN_012495-T1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
LLU|FUN_012496-T1
LLU|FUN_012497-T1
LLU|FUN_012498-T1
LLU|FUN_012499-T1
LLU|FUN_012500-T1
LLU|FUN_012501-T1
LLU|FUN_012502-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_012503-T1THYROTROPIN-RELEASING HORMONE RECEPTOR
LLU|FUN_012504-T1
LLU|FUN_012505-T1
LLU|FUN_012506-T1AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE
LLU|FUN_012507-T1
LLU|FUN_012508-T1
LLU|FUN_012509-T1NON-SMC ELEMENT 1-RELATED
LLU|FUN_012510-T1RNA HELICASE
LLU|FUN_012511-T1
LLU|FUN_012512-T1
LLU|FUN_012513-T1
LLU|FUN_012514-T1
LLU|FUN_012515-T1
LLU|FUN_012516-T1NUCLEAR PORE COMPLEX PROTEIN NUP
LLU|FUN_012517-T1EH DOMAIN
LLU|FUN_012518-T1
LLU|FUN_012519-T1
LLU|FUN_012520-T1TROPONIN
LLU|FUN_012521-T1
LLU|FUN_012522-T1
LLU|FUN_012523-T1
LLU|FUN_012524-T1
LLU|FUN_012525-T1
LLU|FUN_012526-T1
LLU|FUN_012527-T1
LLU|FUN_012528-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_012529-T1THAP DOMAIN PROTEIN
LLU|FUN_012530-T1
LLU|FUN_012531-T1
LLU|FUN_012532-T1
LLU|FUN_012533-T1
LLU|FUN_012534-T1
LLU|FUN_012535-T1
LLU|FUN_012536-T1
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