About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_012537-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
LLU|FUN_012538-T1
LLU|FUN_012539-T1
LLU|FUN_012540-T1UNCHARACTERIZED
LLU|FUN_012541-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_012542-T1
LLU|FUN_012543-T1
LLU|FUN_012544-T1
LLU|FUN_012545-T1
LLU|FUN_012546-T1
LLU|FUN_012547-T1
LLU|FUN_012548-T1
LLU|FUN_012549-T1
LLU|FUN_012550-T1
LLU|FUN_012551-T1MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
LLU|FUN_012552-T1
LLU|FUN_012553-T1MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
LLU|FUN_012554-T1
LLU|FUN_012555-T1MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
LLU|FUN_012556-T1
LLU|FUN_012557-T1
LLU|FUN_012558-T1
LLU|FUN_012559-T1SWIM-TYPE DOMAIN-CONTAINING PROTEIN
LLU|FUN_012560-T1POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1
LLU|FUN_012561-T1
LLU|FUN_012562-T1ACYLPYRUVASE
LLU|FUN_012563-T1
LLU|FUN_012564-T1PROTEIN PHOSPHATASE 2C
LLU|FUN_012565-T1
LLU|FUN_012566-T1CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED
LLU|FUN_012567-T1CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED
LLU|FUN_012568-T1
LLU|FUN_012569-T1TYROSINE-PROTEIN KINASE RECEPTOR
LLU|FUN_012570-T1
LLU|FUN_012571-T1ATP-BINDING CASSETTE SUB-FAMILY C
LLU|FUN_012572-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_012573-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_012574-T1COLLAGEN ALPHA
LLU|FUN_012575-T1
LLU|FUN_012576-T1
LLU|FUN_012577-T1SODIUM CHANNEL AND CLATHRIN LINKER 1
LLU|FUN_012578-T1JM1 PROTEIN
LLU|FUN_012579-T1
LLU|FUN_012580-T1ATP-BINDING CASSETTE SUB-FAMILY C
LLU|FUN_012581-T1RHO FAMILY GTPASE
LLU|FUN_012582-T1RHO FAMILY GTPASE
LLU|FUN_012583-T1RHO FAMILY GTPASE
LLU|FUN_012584-T1ATP-DEPENDENT RNA HELICASE DBP3
LLU|FUN_012585-T1
LLU|FUN_012586-T1
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