About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_012940-T1
LLU|FUN_012941-T12-AMINOETHYLPHOSPHONATE--PYRUVATE TRANSAMINASE
LLU|FUN_012942-T1
LLU|FUN_012943-T1CLASPIN
LLU|FUN_012944-T1
LLU|FUN_012945-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_012946-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_012947-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_012948-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_012949-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_012950-T12-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
LLU|FUN_012951-T1
LLU|FUN_012952-T1INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_012953-T1DEOXYRIBONUCLEASE
LLU|FUN_012954-T1DEOXYRIBONUCLEASE
LLU|FUN_012955-T1
LLU|FUN_012956-T1
LLU|FUN_012957-T1
LLU|FUN_012958-T1
LLU|FUN_012959-T1ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE, PEROXISOMAL
LLU|FUN_012960-T1
LLU|FUN_012961-T1
LLU|FUN_012962-T1
LLU|FUN_012963-T1
LLU|FUN_012964-T1PROTEASOME SUBUNIT ALPHA/BETA
LLU|FUN_012965-T1
LLU|FUN_012966-T1
LLU|FUN_012967-T1FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE
LLU|FUN_012968-T1UNCHARACTERIZED PROTEIN KIAA2013
LLU|FUN_012969-T1NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1
LLU|FUN_012970-T1PEROXISOMAL MEMBRANE PROTEIN 4
LLU|FUN_012971-T1
LLU|FUN_012972-T1
LLU|FUN_012973-T1
LLU|FUN_012974-T1
LLU|FUN_012975-T1FRIZZLED
LLU|FUN_012976-T1
LLU|FUN_012977-T1
LLU|FUN_012978-T1
LLU|FUN_012979-T1
LLU|FUN_012980-T1
LLU|FUN_012981-T1
LLU|FUN_012982-T1HEMOGLOBINASE FAMILY MEMBER
LLU|FUN_012983-T1FORMIN HOMOLOGY 2 FAMILY MEMBER
LLU|FUN_012984-T1
LLU|FUN_012985-T1
LLU|FUN_012992-T130S RIBOSOMAL PROTEIN S1
LLU|FUN_012993-T1ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-RELATED
LLU|FUN_012994-T1RIBOSOMAL PROTEIN S6 KINASE
LLU|FUN_012995-T1CENTROSOMAL PROTEIN OF 128 KDA
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