About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides0526252 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides05263HEAVY PROTEIN, PUTATIVE-RELATED
Paelopatides05264PROTEIN CBG26694
Paelopatides05265PHOSPHOLIPASE B, PLB1
Paelopatides05266-
Paelopatides05267-
Paelopatides05268PHOSPHOLIPASE B, PLB1
Paelopatides05269-
Paelopatides05270INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides05271PROTEIN CBG26694
Paelopatides05272CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides05274EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED
Paelopatides05275-
Paelopatides05276-
Paelopatides05277-
Paelopatides05278COILED-COIL DOMAIN-CONTAINING PROTEIN 162
Paelopatides05279-
Paelopatides05280PETER PAN-RELATED
Paelopatides05281REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05282-
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