About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides05326SI:CH211-108C17.2-RELATED-RELATED
Paelopatides05327ZGC:195170
Paelopatides05328REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05329CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides05330-
Paelopatides05331-
Paelopatides05332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05333REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05334UBX DOMAIN CONTAINING PROTEIN
Paelopatides05336-
Paelopatides05337THAP DOMAIN-CONTAINING PROTEIN 6
Paelopatides05338SAM DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides05339PORCUPINE
Paelopatides05340CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL
Paelopatides05341BLADDER CANCER 10 KD PROTEIN HOMOLOG
Paelopatides05342-
Paelopatides05343PH DOMAIN-CONTAINING PROTEIN
Paelopatides05344POL PROTEIN
Paelopatides05345-
Paelopatides05346-
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