About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides05199PROTEIN CBG26694
Paelopatides05200PROTEIN CBG26694
Paelopatides05201PROTEIN CBG26694
Paelopatides05203ETS
Paelopatides05204PROTEIN CBG26694
Paelopatides05205-
Paelopatides05206-
Paelopatides05207-
Paelopatides05208ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides05209PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
Paelopatides05210-
Paelopatides05211CYSTEINE-RICH MOTOR NEURON 1 PROTEIN
Paelopatides05212PHOSPHOLIPASE D
Paelopatides05213-
Paelopatides05214-
Paelopatides05215REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05216FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides05217-
Paelopatides05218REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05219TRANSMEMBRANE PROTEIN 151 HOMOLOG
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