About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides05095FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides05096-
Paelopatides05097PARANEOPLASTIC ANTIGEN
Paelopatides05098RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER
Paelopatides05099-
Paelopatides05100-
Paelopatides05101VOLTAGE-GATED POTASSIUM CHANNEL
Paelopatides05102EPH RECEPTOR A5
Paelopatides05103GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
Paelopatides05104-
Paelopatides05105-
Paelopatides05106PROTEIN CBG26694
Paelopatides05107-
Paelopatides05108-
Paelopatides05109INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides05110FE2OG DIOXYGENASE DOMAIN-CONTAINING PROTEIN
Paelopatides05111-
Paelopatides05112AP COMPLEX SUBUNIT MU
Paelopatides05113CHLORIDE CHANNEL PROTEIN 2
Paelopatides05114-
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