About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides04992-
Paelopatides04993CBF1 INTERACTING COREPRESSOR CIR
Paelopatides04994LOC361192
Paelopatides04995ARSENITE-RESISTANCE PROTEIN 2
Paelopatides04996ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides04997FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides04998FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides04999DNA HELICASE RECQ FAMILY MEMBER
Paelopatides05000RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides05001RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides05002REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05003HEAT SHOCK PROTEIN 70KDA
Paelopatides05004LITHOSTATHINE
Paelopatides05005REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05006-
Paelopatides05007GLYCOSYL TRANSFERASE-RELATED
Paelopatides05008-
Paelopatides05009TRANSPOSON
Paelopatides05010REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05011FI19922P1-RELATED
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