About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides05155-
Paelopatides05156-
Paelopatides05157-
Paelopatides05158-
Paelopatides05159ACROSIN-RELATED
Paelopatides05160GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 2
Paelopatides05161GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 2
Paelopatides05162CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides05163PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides05164-
Paelopatides05165NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides05166TRANSDUCER OF ERBB2 TOB
Paelopatides05169-
Paelopatides05170-
Paelopatides05171PUTATIVE-RELATED
Paelopatides05172CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides05173PROTEIN CBG26694
Paelopatides05174PROTEIN CBG26694
Paelopatides05175-
Paelopatides05176-
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