About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides05115POL PROTEIN
Paelopatides05116BONUS, ISOFORM C-RELATED
Paelopatides05117BONUS, ISOFORM C-RELATED
Paelopatides05118PID DOMAIN-CONTAINING PROTEIN
Paelopatides05119-
Paelopatides05120-
Paelopatides05121PROTEIN CBG26694
Paelopatides05122-
Paelopatides05123-
Paelopatides05124L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides05125UNCHARACTERIZED
Paelopatides05126-
Paelopatides05127-
Paelopatides05128REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05129CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides05130GH11602P
Paelopatides05131-
Paelopatides05132-
Paelopatides05133ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides05134NETRIN RECEPTOR UNC5
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