About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides05304CAMK FAMILY PROTEIN KINASE
Paelopatides05305-
Paelopatides05306UBIQUITIN
Paelopatides05307PROTEIN CBG26694
Paelopatides053082-AMINOMUCONIC SEMIALDEHYDE DEHYDROGENASE
Paelopatides05309PROTEIN CBG26694
Paelopatides05310PARANEOPLASTIC ANTIGEN
Paelopatides05311COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
Paelopatides05312N-LYSINE METHYLTRANSFERASE KMT5A
Paelopatides05313SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides05314SERINE/THREONINE-PROTEIN KINASE ATM
Paelopatides05315STYLE CELL-CYCLE INHIBITOR 1
Paelopatides05316-
Paelopatides05317-
Paelopatides05318ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides05319-
Paelopatides05320-
Paelopatides05321GTP-BINDING
Paelopatides05322-
Paelopatides05323-
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