About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides05387-
Paelopatides05388-
Paelopatides05389PROTEIN EVA-1
Paelopatides05390-
Paelopatides05391D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL
Paelopatides05392D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL
Paelopatides05393-
Paelopatides05394-
Paelopatides05395-
Paelopatides05396-
Paelopatides05397-
Paelopatides05398-
Paelopatides05399FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides05400ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Paelopatides05401PROPERDIN
Paelopatides05402AGAP005574-PA
Paelopatides05403REVERSE TRANSCRIPTASES
Paelopatides05404-
Paelopatides05405THAP DOMAIN PROTEIN
Paelopatides05406EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
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