About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides05427PROTEIN CBG26694
Paelopatides05428PROTEIN CBG26694
Paelopatides05429PROTEIN CBG26694
Paelopatides05430PROTEIN CBG26694
Paelopatides05431PROTEIN CBG26694
Paelopatides05432PROTEIN CBG26694
Paelopatides05433REVERSE TRANSCRIPTASES
Paelopatides05434-
Paelopatides05435INOSITOL 5-PHOSPHATASE
Paelopatides05436NG5
Paelopatides05437-
Paelopatides05438-
Paelopatides05439PATCHED-RELATED
Paelopatides05440PATCHED-RELATED
Paelopatides05441-
Paelopatides05442REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05443-
Paelopatides05444LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides05445REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides05446NETRIN RECEPTOR UNC5
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