About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54080CHARGED MULTIVESICULAR BODY PROTEIN
Paelopatides54081-
Paelopatides54082TBC1 DOMAIN FAMILY MEMBER 19
Paelopatides54083TRANSPOSON
Paelopatides54084UNCHARACTERIZED
Paelopatides54085UNCHARACTERIZED
Paelopatides54086-
Paelopatides54087PARANEOPLASTIC ANTIGEN
Paelopatides54088-
Paelopatides54089CADHERIN-87A
Paelopatides54091AGAP005574-PA
Paelopatides54092-
Paelopatides54093-
Paelopatides54094-
Paelopatides54095-
Paelopatides54096-
Paelopatides54097ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54098SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54099-
Paelopatides54100-
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