About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54060ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides54061CULLIN
Paelopatides54062CULLIN
Paelopatides54063CULLIN
Paelopatides54064PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides54065-
Paelopatides54066BUCENTAUR RELATED
Paelopatides54067SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides54068URACIL-DNA GLYCOSYLASE
Paelopatides54069MITOFILIN
Paelopatides54070PROTEIN DPCD
Paelopatides54071PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides54072PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides54073PROTEIN CBG26694
Paelopatides54074GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNIT
Paelopatides54075UNCHARACTERIZED
Paelopatides54076ALPHA CATENIN
Paelopatides54077ALPHA CATENIN
Paelopatides54078-
Paelopatides54079CHARGED MULTIVESICULAR BODY PROTEIN
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