About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53953PROTEIN CBG26694
Paelopatides53954STG PROTEIN
Paelopatides53955RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides53956RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides53957-
Paelopatides53958-
Paelopatides53959APPLE DOMAIN-CONTAINING PROTEIN
Paelopatides53960TRANSMEMBRANE PROTEIN 68
Paelopatides53961RAS-RELATED PROTEIN RAB
Paelopatides53962-
Paelopatides53963KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Paelopatides53964TALIN ROD DOMAIN-CONTAINING PROTEIN 1
Paelopatides53966RETROTRANSPOSON
Paelopatides53967RETROTRANSPOSON
Paelopatides53968-
Paelopatides53969REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53970GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides53971-
Paelopatides53972-
Paelopatides53973AMINO ACID TRANSPORTER
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