About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53851-
Paelopatides53852-
Paelopatides53853O-METHYLTRANSFERASE-RELATED
Paelopatides53854PROTEIN CBG26694
Paelopatides53855TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides53856BUCENTAUR RELATED
Paelopatides53857MYOSIN LIGHT CHAIN 1, 3
Paelopatides53858-
Paelopatides53859ANOCTAMIN
Paelopatides53860-
Paelopatides53861GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides53864CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides53865CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides53866LD39211P
Paelopatides53867CYTOSOLIC CARBOXYPEPTIDASE
Paelopatides53868-
Paelopatides53869REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53870REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53871BUCENTAUR RELATED
Paelopatides53872-
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