About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53873-
Paelopatides53874T-CELL IMMUNOMODULATORY PROTEIN HOMOLOG
Paelopatides53875-
Paelopatides53876FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I
Paelopatides53877PROTEIN DIAPHANOUS
Paelopatides53878FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I
Paelopatides53879FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I
Paelopatides53880FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I
Paelopatides53881-
Paelopatides53882-
Paelopatides53883MUCIN 4-RELATED
Paelopatides53884-
Paelopatides53885-
Paelopatides53886MUCIN 4-RELATED
Paelopatides53887-
Paelopatides53888FAMILY WITH SEQUENCE SIMILARITY 102
Paelopatides53889TRANSFERRIN
Paelopatides53890-
Paelopatides53891TRANSFERRIN
Paelopatides53892ATP-DEPENDENT RNA HELICASE
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