About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53765-
Paelopatides53766-
Paelopatides53767-
Paelopatides53772-
Paelopatides53773PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides53774BUCENTAUR RELATED
Paelopatides53775THO COMPLEX SUBUNIT 6 HOMOLOG
Paelopatides53776ZGC:101858
Paelopatides53777ZGC:101858
Paelopatides53778ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides53779PROTEIN CBG26694
Paelopatides53780IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides53781REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53782ENDONUCLEASE
Paelopatides53783ATP-DEPENDENT RNA HELICASE
Paelopatides53784-
Paelopatides53785-
Paelopatides53786E1A-BINDING PROTEIN P400-RELATED
Paelopatides53787REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53788HELICASE SRCAP-RELATED
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