About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53724PROTEIN CBG23806
Paelopatides53725-
Paelopatides53726-
Paelopatides53727-
Paelopatides53728CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides53729PROTEIN CBG26694
Paelopatides53730-
Paelopatides53731-
Paelopatides53732CYSTATIN FAMILY MEMBER
Paelopatides53733PROTEIN CBG26694
Paelopatides53734-
Paelopatides53735-
Paelopatides53736-
Paelopatides53737GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides53738-
Paelopatides53739-
Paelopatides53740-
Paelopatides53741DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Paelopatides53742COMPLEMENT FACTOR H-RELATED
Paelopatides53743COMPLEMENT FACTOR H-RELATED
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