About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53893SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
Paelopatides53894SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
Paelopatides53895EPM2A-INTERACTING PROTEIN 1
Paelopatides53896-
Paelopatides53897NETRIN/LAMININ-RELATED
Paelopatides53898-
Paelopatides53899CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides53900-
Paelopatides53901PROTEIN CBG26694
Paelopatides53902CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides53903THIOESTERASE SUPERFAMILY MEMBER-RELATED
Paelopatides53904THIOESTERASE SUPERFAMILY MEMBER-RELATED
Paelopatides53905UNCHARACTERIZED
Paelopatides53906-
Paelopatides53907REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53908SPERMATOGENESIS-ASSOCIATED PROTEIN 24
Paelopatides53909WD40 REPEAT PF20
Paelopatides53910-
Paelopatides53911-
Paelopatides53912G-PROTEIN COUPLED RECEPTOR 124-LIKE PROTEIN
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