About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53996CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides53997-
Paelopatides53998-
Paelopatides53999-
Paelopatides54001CALCIUM BINDING PROTEINS
Paelopatides54002ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides54003URINARY PROTEIN RUP /ACROSOMAL PROTEIN SP-10
Paelopatides54004-
Paelopatides54005-
Paelopatides54006GTP-BINDING
Paelopatides54007-
Paelopatides54008PROTEIN CBG26694
Paelopatides54009PROTEIN CBG26694
Paelopatides54010FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE
Paelopatides54011SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54012-
Paelopatides54013SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides54014-
Paelopatides54015SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides54017DIMETHYLANILINE MONOOXYGENASE
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