About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides54018TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides54019-
Paelopatides54020REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides54021DIMETHYLANILINE MONOOXYGENASE
Paelopatides54022COPROPORPHYRINIGEN III OXIDASE
Paelopatides54023COPROPORPHYRINIGEN III OXIDASE
Paelopatides54024KINESIN LIGHT CHAIN
Paelopatides54025-
Paelopatides54026PROTEIN CBG26694
Paelopatides54027FATTY ACID ACYL TRANSFERASE-RELATED
Paelopatides54028UNCHARACTERIZED
Paelopatides54029SPERM-SPECIFIC FAMILY, CLASS Q
Paelopatides54030-
Paelopatides54031-
Paelopatides54032-
Paelopatides54033SKELETOR-RELATED
Paelopatides54034CRUMBS FAMILY MEMBER
Paelopatides54035ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides54036-
Paelopatides54037TRANSPOSON
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