About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides52154SIKE FAMILY MEMBER
Paelopatides52155VOLTAGE-GATED POTASSIUM CHANNEL
Paelopatides52157VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides52158VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides52159UBIQUITIN-CONJUGATING ENZYME E2
Paelopatides52160-
Paelopatides52161ENZYMATIC POLYPROTEIN-RELATED
Paelopatides52162-
Paelopatides52163CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE
Paelopatides52164CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE
Paelopatides52165-
Paelopatides52166-
Paelopatides52167-
Paelopatides52168-
Paelopatides52169LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
Paelopatides52170LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
Paelopatides52171-
Paelopatides52172SULFOTRANSFERASE SULT
Paelopatides52173CARBONYL REDUCTASE 1-RELATED
Paelopatides52174ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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