About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides52023BCL7 RELATED
Paelopatides52024OXIDASE/PEROXIDASE
Paelopatides52025REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52026PROTEIN CBG26694
Paelopatides52027ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides52028SI:CH211-196P9.1-RELATED
Paelopatides52029RAP1 GTPASE-GDP DISSOCIATION STIMULATOR 1
Paelopatides52030NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1
Paelopatides52031NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1
Paelopatides52032FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides52033TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides52034FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides52035REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52036CHARGED MULTIVESICULAR BODY PROTEIN
Paelopatides52037G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides52038-
Paelopatides52039REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52040-
Paelopatides52041BONUS, ISOFORM C-RELATED
Paelopatides52042BONUS, ISOFORM C-RELATED
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