About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51962GTP-BINDING
Paelopatides51963GTP-BINDING
Paelopatides51964FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides51965GTP-BINDING
Paelopatides51966RAS-RELATED PROTEIN RAB
Paelopatides51967-
Paelopatides51968REVERSE TRANSCRIPTASES
Paelopatides51969REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51970PROTEIN FAM167A
Paelopatides51971-
Paelopatides51972-
Paelopatides51973-
Paelopatides51974CALCIUM-BINDING PROTEIN 8-RELATED
Paelopatides51975GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides51976PROTEIN CBG26694
Paelopatides51977UNCHARACTERIZED
Paelopatides51978REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51979-
Paelopatides51980PROTEIN CBG26694
Paelopatides51981-
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