About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides52217SI:CH211-196P9.1-RELATED
Paelopatides52218-
Paelopatides52219MUCIN-22
Paelopatides52220ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
Paelopatides52221REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52222PEPTIDASE
Paelopatides52223AGAP008170-PA
Paelopatides52224-
Paelopatides52225COUNTIN RECEPTOR CNR3-RELATED
Paelopatides52226-
Paelopatides52227HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides5222830S 40S RIBOSOMAL PROTEIN
Paelopatides52229LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 3
Paelopatides52230-
Paelopatides52231THAP DOMAIN PROTEIN
Paelopatides52232-
Paelopatides52233-
Paelopatides52234ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Paelopatides52235-
Paelopatides52236-
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