About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

<< First 238 239 240 241 242 243 244 245 246 247 Forward> Last>>        725 pages in total

Gene IDDescription
Clavulariidae_g20933RETROTRANSPOSON
Clavulariidae_g20934COLLAGEN ALPHA
Clavulariidae_g20935
Clavulariidae_g20936DNA POLYMERASE
Clavulariidae_g20937
Clavulariidae_g20938
Clavulariidae_g20939LOQUACIOUS, ISOFORM B
Clavulariidae_g2094CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
Clavulariidae_g20940
Clavulariidae_g20941TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Clavulariidae_g20942
Clavulariidae_g20943REVERSE TRANSCRIPTASE
Clavulariidae_g20944ANTHRAX TOXIN RECEPTOR
Clavulariidae_g20945
Clavulariidae_g20946ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g20947COLLAGEN ALPHA
Clavulariidae_g20948PHD-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g20949INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
Clavulariidae_g2095
Clavulariidae_g20950
Clavulariidae_g20951
Clavulariidae_g20952
Clavulariidae_g20953
Clavulariidae_g20954
Clavulariidae_g20955TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Clavulariidae_g20956REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g20957
Clavulariidae_g20958
Clavulariidae_g20959COLLAGEN ALPHA
Clavulariidae_g2096
Clavulariidae_g20960CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED
Clavulariidae_g20961
Clavulariidae_g20962
Clavulariidae_g20963REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g20964
Clavulariidae_g20965
Clavulariidae_g20966GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
Clavulariidae_g20967CXXC-TYPE ZINC FINGER PROTEIN 1
Clavulariidae_g20968
Clavulariidae_g20969GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
Clavulariidae_g2097
Clavulariidae_g20970
Clavulariidae_g20971GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
Clavulariidae_g20972REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g20973CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g20974TRANSPOSASE, PUTATIVE-RELATED
Clavulariidae_g20975
Clavulariidae_g20976GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
Clavulariidae_g20977DUF3504 DOMAIN-CONTAINING PROTEIN
Clavulariidae_g20978ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
TOP