Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8009473.1 | MEDIATOR COMPLEX SUBUNIT |
| CAI8009472.1 | MEDIATOR COMPLEX SUBUNIT |
| CAI8009471.1 | MEDIATOR COMPLEX SUBUNIT |
| CAI8009474.1 | MEDIATOR COMPLEX SUBUNIT |
| CAI8009476.1 | MEDIATOR COMPLEX SUBUNIT |
| CAI8009475.1 | |
| CAI8009477.1 | MEDIATOR COMPLEX SUBUNIT |
| CAI8009478.1 | |
| CAI8009479.1 | CGI-141-RELATED/LIPASE CONTAINING PROTEIN |
| CAI8009481.1 | CGI-141-RELATED/LIPASE CONTAINING PROTEIN |
| CAI8009480.1 | CGI-141-RELATED/LIPASE CONTAINING PROTEIN |
| CAI8009483.1 | TRANSPORTER ARSB-RELATED |
| CAI8009482.1 | TRANSPORTER ARSB-RELATED |
| CAI8009484.1 | TRANSPORTER ARSB-RELATED |
| CAI8009485.1 | TRANSPORTER ARSB-RELATED |
| CAI8009486.1 | TRANSPORTER ARSB-RELATED |
| CAI8009487.1 | TRANSPORTER ARSB-RELATED |
| CAI8009488.1 | TRANSPORTER ARSB-RELATED |
| CAI8009489.1 | CHARGED MULTIVESICULAR BODY PROTEIN |
| CAI8009490.1 | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 |
| CAI8009491.1 | |
| CAI8009492.1 | |
| CAI8009497.1 | ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 |
| CAI8009496.1 | ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 |
| CAI8009495.1 | ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 |
| CAI8009498.1 | ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 |
| CAI8009493.1 | ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 |
| CAI8009494.1 | ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 |
| CAI8009499.1 | |
| CAI8009500.1 | |
| CAI8009501.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI8009502.1 | PHYTANOYL-COA DIOXYGENASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_2G03330) |
| CAI8009503.1 | TRANSLATION ELONGATION FACTOR-RELATED |
| CAI8009505.1 | |
| CAI8009504.1 | |
| CAI8009508.1 | THROMBOXANE-A SYNTHASE |
| CAI8009507.1 | THROMBOXANE-A SYNTHASE |
| CAI8009506.1 | THROMBOXANE-A SYNTHASE |
| CAI8009509.1 | CYTOCHROME P450 |
| CAI8009510.1 | |
| CAI8009512.1 | |
| CAI8009511.1 | |
| CAI8009513.1 | PROTEIN CBG26694 |
| CAI8009514.1 | |
| CAI8009516.1 | |
| CAI8009515.1 | |
| CAI8009520.1 | SPERMIDINE/PUTRESCINE IMPORT ATP-BINDING PROTEIN POTA |
| CAI8009521.1 | SPERMIDINE/PUTRESCINE IMPORT ATP-BINDING PROTEIN POTA |
| CAI8009518.1 | SPERMIDINE/PUTRESCINE IMPORT ATP-BINDING PROTEIN POTA |
| CAI8009517.1 | SPERMIDINE/PUTRESCINE IMPORT ATP-BINDING PROTEIN POTA |
