About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Key Reference Paper

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 235 236 237 238 239 240 241 242 243 244 Forward> Last>>        3063 pages in total

Gene IDDescription
CAI7998788.150S RIBOSOMAL PROTEIN L3
CAI7998786.150S RIBOSOMAL PROTEIN L3
CAI7998784.150S RIBOSOMAL PROTEIN L3
CAI7998782.150S RIBOSOMAL PROTEIN L3
CAI7998790.1TRANSLATION ELONGATION FACTOR G-RELATED
CAI7998792.1TRANSLATION ELONGATION FACTOR G-RELATED
CAI7998794.1-
CAI7998800.1RIBOSOMAL PROTEIN S7
CAI7998798.1RIBOSOMAL PROTEIN S7
CAI7998796.1RIBOSOMAL PROTEIN S7
CAI7998802.130S RIBOSOMAL PROTEIN S12 FAMILY MEMBER
CAI7998804.1GAMMA-GLUTAMYLPUTRESCINE SYNTHETASE
CAI7998806.1FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE
CAI7998808.1GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN
CAI7998810.1NH 3 /GLUTAMINE-DEPENDENT NAD + SYNTHETASE
CAI7998812.1PEPTIDASE S12
CAI7998814.1RECA
CAI7998820.1BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH
CAI7998824.1BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH
CAI7998826.1BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH
TOP