About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8009371.1
CAI8009372.1
CAI8009374.1ACTIN
CAI8009373.1ACTIN
CAI8009375.1ACTIN
CAI8009378.1
CAI8009379.1
CAI8009377.1
CAI8009376.1
CAI8009381.1
CAI8009382.1
CAI8009380.1
CAI8009383.1
CAI8009384.1
CAI8009385.1
CAI8009389.1PHOSPHOLIPASE D
CAI8009388.1PHOSPHOLIPASE D
CAI8009387.1
CAI8009386.1
CAI8009390.1PHOSPHOLIPASE D
CAI8009395.1RIBONUCLEASE T2
CAI8009393.1RIBONUCLEASE T2
CAI8009396.1RIBONUCLEASE T2
CAI8009394.1RIBONUCLEASE T2
CAI8009392.1RIBONUCLEASE T2
CAI8009397.1RIBONUCLEASE T2
CAI8009391.1RIBONUCLEASE T2
CAI8009398.1RIBONUCLEASE T2
CAI8009399.1RIBONUCLEASE T2
CAI8009402.1
CAI8009401.1
CAI8009400.1
CAI8009403.1TRANSPOSABLE ELEMENT-RELATED
CAI8009404.1DUF4291 DOMAIN-CONTAINING PROTEIN
CAI8009406.1THROMBOXANE-A SYNTHASE
CAI8009405.1
CAI8009407.1CYTOCHROME P450
CAI8009408.1
CAI8009409.1
CAI8009411.1
CAI8009410.1
CAI8009412.1
CAI8009413.1
CAI8009414.1
CAI8009417.1V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A
CAI8009415.1V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A
CAI8009418.1V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A
CAI8009416.1
CAI8009420.1TRANSPOSASE INSF FOR INSERTION SEQUENCE IS3B-RELATED
CAI8009419.1TRANSPOSASE INSF FOR INSERTION SEQUENCE IS3B-RELATED
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