About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51087GLYCOPROTEIN HORMONE RECEPTOR
Paelopatides51088-
Paelopatides51089-
Paelopatides51090-
Paelopatides51091-
Paelopatides51092SPECTRIN REPEAT CONTAINING NUCLEAR ENVELOPE PROTEIN 2
Paelopatides51093SPECTRIN REPEAT CONTAINING NUCLEAR ENVELOPE PROTEIN 2
Paelopatides51094PROTEIN CBG26694
Paelopatides51095PKA ANCHORING PROTEIN
Paelopatides51096UDP/ADP-SUGAR PYROPHOSPHATASE
Paelopatides51097PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides51098GTP-BINDING PROTEIN ALPHA SUBUNIT
Paelopatides51099-
Paelopatides51100-
Paelopatides51101GTP-BINDING PROTEIN ALPHA SUBUNIT
Paelopatides51102BUCENTAUR RELATED
Paelopatides51103PROTEIN CBG26694
Paelopatides51104-
Paelopatides51105PROTEIN CBG26694
Paelopatides51106-
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