About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51107-
Paelopatides51108DIHYDRODIPICOLINATE SYNTHASE
Paelopatides51109BADF TYPE ATPASE DOMAIN-CONTAINING PROTEIN
Paelopatides51110TRANSMEMBRANE PROTEIN 127
Paelopatides51111EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 9
Paelopatides51112PHOSPHOLIPID SCRAMBLASE-RELATED
Paelopatides51113-
Paelopatides51114-
Paelopatides51115LYSINE-SPECIFIC DEMETHYLASE
Paelopatides51116-
Paelopatides51117-
Paelopatides51118CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides51119CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides51120EPM2A-INTERACTING PROTEIN 1
Paelopatides51121PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides51122EPM2A-INTERACTING PROTEIN 1
Paelopatides51123-
Paelopatides51124SI:CH211-108C17.2-RELATED-RELATED
Paelopatides51125SYNAPTIC VESICLE GLYCOPROTEIN 2
Paelopatides51126-
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