About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51047FACIOGENITAL DYSPLASIA PROTEIN
Paelopatides51048-
Paelopatides51049-
Paelopatides51050SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides51051DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN
Paelopatides51052-
Paelopatides51053-
Paelopatides51054ACROSIN-RELATED
Paelopatides51055G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN
Paelopatides51056SCAVENGER RECEPTOR DOMAIN-CONTAINING
Paelopatides51057RETROTRANSPOSON
Paelopatides51058PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides51059ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides51060SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides51061-
Paelopatides51062DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL
Paelopatides51063CELL FATE DETERMINING PROTEIN MAB21-RELATED
Paelopatides51064-
Paelopatides51065-
Paelopatides51066-
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