About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50942UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN
Paelopatides50943TYROSINE-PROTEIN KINASE
Paelopatides50944-
Paelopatides50945-
Paelopatides50946-
Paelopatides50947TWINFILIN
Paelopatides50948-
Paelopatides50949SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides50950SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides50951GLUTAMATE RECEPTOR-INTERACTING PROTEIN GRIP
Paelopatides50952GLUTAMATE RECEPTOR-INTERACTING PROTEIN GRIP
Paelopatides50953NINJURIN-RELATED
Paelopatides50954SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED
Paelopatides50955-
Paelopatides50956SODIUM-BILE ACID COTRANSPORTER
Paelopatides50957-
Paelopatides50958F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides50959BUCENTAUR RELATED
Paelopatides50960REVERSE TRANSCRIPTASES
Paelopatides50961REVERSE TRANSCRIPTASES
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