About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50839UNCHARACTERIZED
Paelopatides50840-
Paelopatides50841PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides50842GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT
Paelopatides50843CYTOKINE RECEPTOR
Paelopatides50844-
Paelopatides50845-
Paelopatides50846-
Paelopatides50847ENDONUCLEASE-RELATED
Paelopatides50848CENTROSOME SPINDLE POLE ASSOCIATED PROTEIN
Paelopatides50849-
Paelopatides50850FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides50851MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides50852-
Paelopatides50853ZYX102 PROTEIN
Paelopatides50854WD40 REPEAT PROTEIN
Paelopatides50855S -2-HYDROXY-ACID OXIDASE-RELATED
Paelopatides50856-
Paelopatides50857-
Paelopatides50858-
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