About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50752-
Paelopatides50753ENZYMATIC POLYPROTEIN-RELATED
Paelopatides50754-
Paelopatides50755-
Paelopatides50757SELENOPROTEIN T
Paelopatides50758MISSHAPEN LIKE KINASE 1
Paelopatides50759MISSHAPEN LIKE KINASE 1
Paelopatides50760-
Paelopatides50761TUBULIN
Paelopatides50762TUBULIN
Paelopatides50763TUBULIN
Paelopatides50764UBIQUITIN-PROTEIN LIGASE E3C
Paelopatides50765CHOLESTEROL OXIDASE
Paelopatides50766-
Paelopatides50767ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides50768-
Paelopatides50774LEPRECAN 1
Paelopatides50775PROTEIN LYSINE HYDROXYLATION COMPLEX COMPONENT
Paelopatides50776-
Paelopatides50777-
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