About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50687PYRROLINE-5-CARBOXYLATE REDUCTASE
Paelopatides50688-
Paelopatides50689INTEGRAL MEMBRANE PROTEIN GPR177
Paelopatides50690INTEGRAL MEMBRANE PROTEIN GPR177
Paelopatides50692ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides50693PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides50695ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides50696ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides50697PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides50698-
Paelopatides50699-
Paelopatides50700-
Paelopatides50701BUCENTAUR RELATED
Paelopatides50702REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides50703-
Paelopatides50704-
Paelopatides50705REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides50706-
Paelopatides50707-
Paelopatides50708-
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