About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50647ARYLACETAMIDE DEACETYLASE
Paelopatides50648-
Paelopatides50649ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides50650POL PROTEIN
Paelopatides50651POL PROTEIN
Paelopatides50652PROTEIN CBG26694
Paelopatides50653ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides50654TYROSINE-PROTEIN KINASE
Paelopatides50655-
Paelopatides50656-
Paelopatides50657FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides50658BUCENTAUR RELATED
Paelopatides50659REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides50660REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides50661ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides50662-
Paelopatides50663REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides50664TNF RECEPTOR ASSOCIATED FACTOR
Paelopatides50665AMINO ACID TRANSPORTER
Paelopatides50666HELICASE WITH DEATH DOMAIN-RELATED
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