About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50605HISTONE H2B
Paelopatides50606HISTONE H4
Paelopatides50607HISTONE H3
Paelopatides50608HISTONE H2A
Paelopatides50609HISTONE H4
Paelopatides50610HISTONE H3
Paelopatides50611HISTONE H2A
Paelopatides50612OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
Paelopatides50613ZGC:195170
Paelopatides50614MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides50615-
Paelopatides50616-
Paelopatides50617LOC361192
Paelopatides50618-
Paelopatides50619RING FINGER AND SRY DOMAIN-CONTAINING
Paelopatides50620-
Paelopatides50621-
Paelopatides50622POLY(A) RNA POLYMERASE
Paelopatides50623PROTEIN CBG26694
Paelopatides50624ENZYMATIC POLYPROTEIN-RELATED
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