About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50483TAX1-BINDING PROTEIN 3-RELATED
Paelopatides50484TAX1-BINDING PROTEIN 3-RELATED
Paelopatides50485DNA TOPOISOMERASE/GYRASE
Paelopatides50486-
Paelopatides50487UBIQUITIN-CONJUGATING ENZYME E2
Paelopatides50488ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides50489ZGC:195170
Paelopatides50491PROTEIN CBG26694
Paelopatides50492-
Paelopatides50493FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides50494FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides50495FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides50496COILED-COIL DOMAIN-CONTAINING PROTEIN 15
Paelopatides50497TYROSINE-PROTEIN KINASE
Paelopatides50498ACROSIN-RELATED
Paelopatides50499ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides50500PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides50501-
Paelopatides50502SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides50503COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
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