About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50354PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides50355-
Paelopatides50356ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides50357-
Paelopatides50358PEPTIDE N-GLYCANASE PNGASE -RELATED
Paelopatides50359-
Paelopatides50360CELL DEATH ACTIVATOR CIDE
Paelopatides50361IP13529P
Paelopatides50362CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides50363CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides50364CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides50365CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides50366-
Paelopatides50367ENOYL-COA HYDRATASE-RELATED
Paelopatides50368ENOYL-COA HYDRATASE-RELATED
Paelopatides50369ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides50370ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides50371PROTEIN CBG23806
Paelopatides50372PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides50373GLUTAMINE SYNTHETASE
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