About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50422-
Paelopatides50423PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides50424-
Paelopatides50425PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
Paelopatides50426-
Paelopatides50427WSCD FAMILY MEMBER CG9164
Paelopatides50428FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides50429-
Paelopatides50430-
Paelopatides50431RTDR1
Paelopatides50432PROTEIN CBG23806
Paelopatides50433-
Paelopatides50434PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
Paelopatides50435CYTOKINE RECEPTOR
Paelopatides50436PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
Paelopatides50437-
Paelopatides50438POL PROTEIN
Paelopatides50439-
Paelopatides50440CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Paelopatides50441-
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