About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50442-
Paelopatides50443X-RAY RADIATION RESISTANCE ASSOCIATED PROTEIN 1 XRRA1
Paelopatides50444X-RAY RADIATION RESISTANCE ASSOCIATED PROTEIN 1 XRRA1
Paelopatides50445X-RAY RADIATION RESISTANCE ASSOCIATED PROTEIN 1 XRRA1
Paelopatides50446STERILE20-LIKE KINASE, ISOFORM B-RELATED
Paelopatides50447CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Paelopatides50448FATTY ACID ACYL TRANSFERASE-RELATED
Paelopatides50450-
Paelopatides50451-
Paelopatides50452METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides50453METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides50454FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides50455INTEGRIN ALPHA
Paelopatides50456PROTEIN CBG26694
Paelopatides50457PROTEIN CBG26694
Paelopatides50458PROTEIN CBG26694
Paelopatides50459INTEGRIN ALPHA
Paelopatides50460-
Paelopatides50461-
Paelopatides50462-
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